I have my subs run off my speakers using a banana to rca cable off the bi wire posts on the speaker.
I am not sure I am understanding how you are saying that you have your subs connected to the system. You are going from your amp to your speakers and then from your speakers to your subs? I connect my sub using RCAs out of my preamp, but typically isn’t the alternate way to go to use speaker wire FROM amp out TO the sub(s) and then speaker wire FROM sub(s) TO speakers? Anyway, that’s the way the diagram shows it in my own subwoofer manual, but maybe that varies by manufacturer?