My files are organized the same as you have it. Because iTunes is easier to manage, I keep my Apple lossless files that way and convert them to WAV files in Foobar. A playlist for the day will be a matter of seconds to convert - that will be the only inconvenience.
Moving everything to Foobar will be possible and should be easy if you are computer savvy. However, I prefer not to go this way because I still use the Apple lossless format in mobile devices.
Moving everything to Foobar will be possible and should be easy if you are computer savvy. However, I prefer not to go this way because I still use the Apple lossless format in mobile devices.