(aware this is a very old topic) The Rogue 99 is a VERY high gain tube preamp. Combining this with NOS 6SN7GT tubes is bad news. No matter how well screened and low-noise selected the tube guy says they are, older GT series 6SN7 are not usable in the 99’s right-side slots (as you face the 99’s front) without noise gremlins. You can maybe get away with them in the left-side slots, but they will also have less sonic impact in those slots. The right-side slots "see" the most downstream gain.
My recommendation is to stick with modern Russian low-noise selected Tung-Sol 6SN7GTB (e.g. Upscale Audio’s Platinum grade) and/or try the later GTA and GTB series Sylvania tubes (angled black plates), which have a design that lowers their microphony (I prefer the tall bottle variants). Some other brands of vintage GTB might be quiet too (Raytheon, RCA), but I haven’t personally tried them in this unit. I know the vintage Tung-Sol GTB are generally quiet, because they used the same Sylvania GTB plates. If you really want to avoid modern tubes, you can try NOS 6SN7GT in the left slots and vintage 6SN7GTB in the right slots.
Ringing or whistling sounds just go hand-in hand with those older GT tubes in high-gain slots, unfortunately. You might think you’ve found a magic "quiet" set, but more often than not it won’t last (as you’ve found). These 6SN7GT tubes have very large plates compared to 12A*7 series tubes, and those 80 year old micas aren’t holding things down firmly enough for the gain levels involved. I do love the older 6SN7GT in power amps, where they are far enough downstream to not surface their noise issues, but still have a big impact (positive) on sound.