There are a few different things going on here.
1. Most speakers comes crap crossovers. Even with higher end speakers, there are compromises with the crossovers. Any company will skimp on parts for profit. Putting in higher end parts of the same values will give you much better sound. As everything audio, there is a point of diminishing returns. Replacing a $1 cap, with a $20 cap will be a night and day difference.
2. Danny has his own view of "perfect" sound. His goal is to always have a pan flat response. He tunes everything to get that.
3. Danny's kits re expensive, and offer mid-grade parts. He also rinse and repeats most of his kits. He is the place to purchase "No-rez" dampening, so it's in every kit. Along with his tube connectors for speaker wire. Again, high priced stuff that is more mid-range.
4. Yes, some of the stuff he is done, the manufacture has noticed and incorporated some of it in the later design. Why not? They get almost free R&D.
Almost any component we purchase some kind of compromise in it to reach a price point. Most of the time, replacing the lower end part with a higher end part will produce better results. This is why we purchase expensive power cables, speaker cables, etc...